• Search by Module
• Search by Words
• Search Projects

• Java
• Python
• JavaScript
• TypeScript
• C++
• Scala
• Blog

• velocyto.py-master
  • velocyto
    • sample_template.csv
    • transcript_model.py
    • estimation.py
    • molitem.py
    • analysis.py
    • logic.py
    • counter.py
    • commands
      • run.py
      • velocyto.py
      • _run.py
      • dropest_bc_correct.py
      • run_dropest.py
      • run_smartseq2.py
      • run10x.py
      • __init__.py
    • diffusion.py
    • r_interface.py
    • segment_match.py
    • read.py
    • constants.py
    • serialization.py
    • indexes.py
    • metadata.py
    • __init__.py
    • utils.py
    • _version.py
    • gene_info.py
    • speedboosted.pyx
    • neighbors.py
    • feature.py
  • LICENSE
  • setup.py
  • setup.cfg
  • .travis.yml
  • README.md
  • .gitignore
  • MANIFEST.in
  • doc
    • Makefile
    • citing
      • index.rst
    • _ext
      • edit_on_github.py
      • __pycache__
        • edit_on_github.cpython-36.pyc
    • tutorial
      • cli.rst
      • index.rst
      • analysis.rst
    • substitutions
      • run_smartseq2.txt
      • run10x.txt
      • velocyto.txt
      • run_dropest.txt
      • dropest_bc_correct.txt
      • run.txt
      • README.md
    • license
      • index.rst
    • notebooks
      • index.rst
    • install
      • index.rst
    • fullapi
      • api_cli_internals.rst
      • api_neighbors.rst
      • cliapi.rst
      • api_estimation.rst
      • api_serialization.rst
      • api_analysis.rst
      • api_diffusion.rst
      • api_cli_logic.rst
      • index.rst
    • index.rst
    • conf.py
    • changelog.rst
    • _templates
      • sourcelink.html

Velocyto

This repo contains the source code for the velocyto.py library.

For more information consult the velocyto.py documentation.