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• skan-master
  • config.json
  • github_deploy_key_jni_skan.enc
  • Makefile
  • skan
    • image_stats.py
    • gui.py
    • test
      • test_draw.py
      • test_csr.py
      • test_io.py
      • test_pre.py
      • test_pipe.py
      • test_vendored_correlate.py
      • data
        • skeleton.tif
      • test_skeleton_class.py
    • _testdata.py
    • pipe.py
    • io.py
    • __init__.py
    • nputil.py
    • vendored
      • __init__.py
      • thresholding.py
    • draw.py
    • csr.py
    • pre.py
  • .coveragerc
  • readthedocs.yml
  • LICENSE
  • .bumpversion.cfg
  • setup.py
  • test-environment.yml
  • benchmarks
    • bench_skan.py
    • infected3.npz
    • .gitattributes
  • setup.cfg
  • .travis.yml
  • README.md
  • requirements.txt
  • .gitignore
  • requirements
    • default.txt
    • test.txt
    • doc.txt
  • MANIFEST.in
  • doc
    • install.rst
    • complete_analysis.rst
    • Makefile
    • make.bat
    • gui.rst
    • example-data
    • api
      • skan.pre.rst
      • api.rst
      • skan.draw.rst
      • skan.pipe.rst
      • skan.csr.rst
      • skan.vendored.thresholding.rst
    • getting_started.rst
    • index.rst
    • conf.py
    • _static

skan: skeleton analysis in Python

Python module to analyse skeleton (thin object) images

See the documentation at https://jni.github.io/skan.