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Project: PyXRF (GitHub Link)

• PyXRF-master
  • github_deploy_key_nsls_ii_pyxrf.enc
  • examples
    • make_hdf_stitched_function.ipynb
    • batch_mode_fit_AND_combine_data_for_recon.ipynb
    • output_data_to_hdf.ipynb
    • Batch_mode_fit_for_APS-2IDE-Bionanoprobe_data.ipynb
    • Batch_mode_fit.ipynb
    • specfile_to_hdf.ipynb
    • summed_spectrum_fit.ipynb
    • data
      • film_11564ev_all.json
      • root_all.json
      • film_25000ev_all.json
      • background_11564ev.json
      • root.json
    • combine_data_for_reconstruction.ipynb
  • pyxrf
    • gui.py
    • simulation
      • __init__.py
      • tests
        • test_sim_xrf_scan_data.py
      • sim_xrf_scan_data.py
    • db_config
      • hxn_db_config.py
      • __init__.py
      • srx_db_config.py
      • tes_db_config.py
      • xfm_db_config.py
    • api.py
    • view
      • lineplot.enaml
      • quant_analysis.enaml
      • image2D.enaml
      • fileio.enaml
      • rgb_image.enaml
      • main_window.enaml
      • __init__.py
      • fit.enaml
      • setting.enaml
      • guessparam.enaml
    • xanes_maps
      • xanes_maps_api.py
      • __init__.py
      • tests
        • test_xanes_maps_api.py
    • __init__.py
    • _version.py
    • core
      • fitting.py
      • yaml_param_files.py
      • quant_analysis.py
      • __init__.py
      • utils.py
      • tests
        • test_yaml_param_files.py
        • test_map_processing.py
        • test_fitting.py
        • test_xrf_utils.py
        • __init__.py
        • test_quant_analysis.py
      • map_processing.py
      • xrf_quant_standards.yaml
      • xrf_utils.py
    • model
      • data_to_analysis_store.py
      • scan_metadata.py
      • guessparam.py
      • param_data.py
      • draw_image.py
      • lineplot.py
      • load_data_from_db.py
      • command_tools.py
      • draw_image_rgb.py
      • __init__.py
      • fileio.py
      • tests
        • __init__.py
      • fit_spectrum.py
      • setting.py
  • LICENSE
  • versioneer.py
  • .flake8
  • .gitattributes
  • .DS_Store
  • run_tests.py
  • setup.py
  • releasenotes.rst
  • requirements-dev.txt
  • log_example.out
  • configs
    • srx_pv_config-original.json
    • srx_pv_config.json
    • hxn_pv_config.json
    • xrf_parameter.json
    • .DS_Store
    • xfm_pv_config.json
    • __init__.py
    • tes_pv_config.json
    • pv_config.json
  • setup.cfg
  • .travis.yml
  • README.md
  • requirements.txt
  • .codecov.yml
  • .gitignore
  • docs
    • credits.rst
    • Makefile
    • make.bat
    • summed_spectrum_fit.rst
    • data_output.rst
    • work_at_beamlines.rst
    • data_input.rst
    • index.rst
    • conf.py
    • _static
    • questions.rst
    • installation.rst
  • requirements-docs.txt
  • MANIFEST.in

PyXRF

PyXRF is a python-based sophisticated fluorescence analysis package for fitting and visualizing X-ray fluorescence data.

PyXRF documentation

Report an issue with PyXRF

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We support installation on Linux/Mac/Windows, please refer to How to install PyXRF

Youtube tutorial

The youtube tutorial of pyxrf is at https://www.youtube.com/watch?v=2nFLccehaHI

Notes

The core fitting functions are a part of the scikit-beam data analysis library for x-ray data analysis. The design philosophy is to separate data fitting and gui for easy maintenance.