Java Code Examples for org.hl7.fhir.dstu3.model.ConceptMap#setId()

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Example 1
Source File: IEEE11073Convertor.java    From org.hl7.fhir.core with Apache License 2.0 5 votes vote down vote up 
private static ConceptMap generateLoincMdcMap(CodeSystem mdc, String dst, String src) throws IOException, FHIRException {
  ConceptMap cm = new ConceptMap();
  cm.setId("loinc-mdc");
  cm.setUrl("http:/???/fhir/ConceptMap/loinc-mdc");
  cm.setVersion("[todo]");
  cm.setName("LoincMdcCrossMap");
  cm.setTitle("Cross Map between LOINC and MDC");
  cm.setStatus(PublicationStatus.DRAFT);
  cm.setExperimental(true);
  cm.setDateElement(new DateTimeType());
  cm.setPublisher("HL7, Inc");
  ContactDetail cd = cm.addContact();
  cd.setName("LOINC + IEEE");
  ContactPoint cp = cd.addTelecom();
  cp.setSystem(ContactPointSystem.URL);
  cp.setValue("http://loinc.org");
  cm.setDescription("A Cross Map between the LOINC and MDC Code systems");
  cm.setPurpose("To implementers map between medical device codes and LOINC codes");
  cm.setCopyright("This content LOINC \u00ae is copyright \u00a9 1995 Regenstrief Institute, Inc. and the LOINC Committee, and available at no cost under the license at http://loinc.org/terms-of-use");
  cm.setSource(new UriType("http://loinc.org/vs"));
  cm.setTarget(new UriType(MDC_ALL_VALUES));
  ConceptMapGroupComponent g = cm.addGroup();
  g.setSource("urn:iso:std:iso:11073:10101");
  g.setTarget("http://loinc.org");

  CSVReader csv = new CSVReader(new FileInputStream(src));
  csv.readHeaders();
  while (csv.line()) {
    SourceElementComponent e = g.addElement();
    e.setCode(csv.cell("IEEE_CF_CODE10"));
    e.setDisplay(csv.cell("IEEE_DESCRIPTION"));
    TargetElementComponent t = e.addTarget();
    t.setEquivalence(ConceptMapEquivalence.EQUIVALENT);
    t.setCode(csv.cell("LOINC_NUM"));
    t.setDisplay(csv.cell("LOINC_LONG_COMMON_NAME"));
  }
  new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(Utilities.path(dst, "conceptmap-"+cm.getId()+".xml")), cm);
  System.out.println("Done");
  return cm;
}