org.hl7.fhir.dstu3.model.MedicationRequest Java Examples
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org.hl7.fhir.dstu3.model.MedicationRequest.
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Example #1
Source File: MedicationRequestProvider.java From careconnect-reference-implementation with Apache License 2.0 | 6 votes |
@Create public MethodOutcome create(HttpServletRequest theRequest, @ResourceParam MedicationRequest prescription) { resourcePermissionProvider.checkPermission("create"); MethodOutcome method = new MethodOutcome(); method.setCreated(true); OperationOutcome opOutcome = new OperationOutcome(); method.setOperationOutcome(opOutcome); try { MedicationRequest newMedicationRequest = prescriptionDao.create(ctx,prescription, null,null); method.setId(newMedicationRequest.getIdElement()); method.setResource(newMedicationRequest); } catch (Exception ex) { ProviderResponseLibrary.handleException(method,ex); } return method; }
Example #2
Source File: MedicationRequestProvider.java From careconnect-reference-implementation with Apache License 2.0 | 6 votes |
@Update public MethodOutcome update(HttpServletRequest theRequest, @ResourceParam MedicationRequest prescription, @IdParam IdType theId, @ConditionalUrlParam String theConditional, RequestDetails theRequestDetails) { resourcePermissionProvider.checkPermission("update"); MethodOutcome method = new MethodOutcome(); method.setCreated(true); OperationOutcome opOutcome = new OperationOutcome(); method.setOperationOutcome(opOutcome); try { MedicationRequest newMedicationRequest = prescriptionDao.create(ctx,prescription, theId, theConditional); method.setId(newMedicationRequest.getIdElement()); method.setResource(newMedicationRequest); } catch (Exception ex) { ProviderResponseLibrary.handleException(method,ex); } return method; }
Example #3
Source File: TestData.java From bunsen with Apache License 2.0 | 5 votes |
/** * Returns a new MedicationRequest for testing. * * @return a FHIR MedicationRequest for testing. */ public static MedicationRequest newMedicationRequest() { MedicationRequest medicationRequest = new MedicationRequest(); medicationRequest.setId("test-medication-request"); CodeableConcept itemCodeableConcept = new CodeableConcept(); itemCodeableConcept.addCoding() .setSystem("http://www.nlm.nih.gov/research/umls/rxnorm") .setCode("103109") .setDisplay("Vitamin E 3 MG Oral Tablet [Ephynal]") .setUserSelected(true); medicationRequest.setMedication(itemCodeableConcept); medicationRequest .setSubject(new Reference("Patient/12345").setDisplay("Here is a display for you.")); medicationRequest.setDosageInstruction(ImmutableList.of( new Dosage().setTiming(new Timing().setRepeat(new TimingRepeatComponent().setCount(10))))); medicationRequest .setSubstitution(new MedicationRequestSubstitutionComponent().setAllowed(true)); return medicationRequest; }
Example #4
Source File: MedicationRequestRepository.java From careconnect-reference-implementation with Apache License 2.0 | 5 votes |
List<MedicationRequestEntity> searchEntity(FhirContext ctx, @OptionalParam(name = MedicationRequest.SP_PATIENT) ReferenceParam patient , @OptionalParam(name = MedicationRequest.SP_CODE) TokenParam code , @OptionalParam(name = MedicationRequest.SP_AUTHOREDON) DateRangeParam dateWritten , @OptionalParam(name = MedicationRequest.SP_STATUS) TokenParam status , @OptionalParam(name = MedicationRequest.SP_IDENTIFIER) TokenParam identifier ,@OptionalParam(name= MedicationRequest.SP_RES_ID) StringParam id , @OptionalParam(name= MedicationRequest.SP_MEDICATION) ReferenceParam medication );
Example #5
Source File: MedicationRequestRepository.java From careconnect-reference-implementation with Apache License 2.0 | 5 votes |
List<MedicationRequest> search(FhirContext ctx, @OptionalParam(name = MedicationRequest.SP_PATIENT) ReferenceParam patient , @OptionalParam(name = MedicationRequest.SP_CODE) TokenParam code , @OptionalParam(name = MedicationRequest.SP_AUTHOREDON) DateRangeParam dateWritten , @OptionalParam(name = MedicationRequest.SP_STATUS) TokenParam status , @OptionalParam(name = MedicationRequest.SP_IDENTIFIER) TokenParam identifier , @OptionalParam(name= MedicationRequest.SP_RES_ID) StringParam id , @OptionalParam(name= MedicationRequest.SP_MEDICATION) ReferenceParam medication );
Example #6
Source File: MedicationRequestProvider.java From careconnect-reference-implementation with Apache License 2.0 | 5 votes |
@Search public List<MedicationRequest> search(HttpServletRequest theRequest, @OptionalParam(name = MedicationRequest.SP_PATIENT) ReferenceParam patient , @OptionalParam(name = MedicationRequest.SP_CODE) TokenParam code , @OptionalParam(name = MedicationRequest.SP_AUTHOREDON) DateRangeParam dateWritten , @OptionalParam(name = MedicationRequest.SP_STATUS) TokenParam status , @OptionalParam(name = MedicationRequest.SP_RES_ID) StringParam resid , @OptionalParam(name = MedicationRequest.SP_IDENTIFIER) TokenParam identifierCode , @OptionalParam(name = MedicationRequest.SP_MEDICATION) ReferenceParam medication ) { return prescriptionDao.search(ctx,patient, code, dateWritten, status,identifierCode,resid,medication); }
Example #7
Source File: MedicationRequestProvider.java From careconnect-reference-implementation with Apache License 2.0 | 5 votes |
@Read() public MedicationRequest get(@IdParam IdType prescriptionId) { resourcePermissionProvider.checkPermission("read"); MedicationRequest prescription = prescriptionDao.read(ctx,prescriptionId); if ( prescription == null) { throw OperationOutcomeFactory.buildOperationOutcomeException( new ResourceNotFoundException("No MedicationRequest/ " + prescriptionId.getIdPart()), OperationOutcome.IssueType.NOTFOUND); } return prescription; }
Example #8
Source File: MedicationRequestEntity.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
public MedicationRequestEntity setIntent(MedicationRequest.MedicationRequestIntent intent) { this.intent = intent; return this; }
Example #9
Source File: MedicationRequestEntity.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
public MedicationRequest.MedicationRequestPriority getPriority() { return priority; }
Example #10
Source File: MedicationRequestEntity.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
public MedicationRequestEntity setPriority(MedicationRequest.MedicationRequestPriority priority) { this.priority = priority; return this; }
Example #11
Source File: MedicationRequestEntity.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
public MedicationRequest.MedicationRequestIntent getIntent() { return intent; }
Example #12
Source File: MedicationRequestEntity.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
public MedicationRequestEntity setStatus(MedicationRequest.MedicationRequestStatus status) { this.status = status; return this; }
Example #13
Source File: MedicationRequestEntity.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
public MedicationRequest.MedicationRequestStatus getStatus() { return status; }
Example #14
Source File: MedicationRequestProvider.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
@Validate public MethodOutcome testResource(@ResourceParam MedicationRequest resource, @Validate.Mode ValidationModeEnum theMode, @Validate.Profile String theProfile) { return resourceTestProvider.testResource(resource,theMode,theProfile); }
Example #15
Source File: MedicationRequestProvider.java From careconnect-reference-implementation with Apache License 2.0 | 4 votes |
@Override public Class<? extends IBaseResource> getResourceType() { return MedicationRequest.class; }
Example #16
Source File: FhirStu3.java From synthea with Apache License 2.0 | 4 votes |
/** * Add a MedicationAdministration if needed for the given medication. * * @param personEntry The Entry for the Person * @param bundle Bundle to add the MedicationAdministration to * @param encounterEntry Current Encounter entry * @param medication The Medication * @param medicationRequest The related medicationRequest * @return The added Entry */ private static BundleEntryComponent medicationAdministration( BundleEntryComponent personEntry, Bundle bundle, BundleEntryComponent encounterEntry, Medication medication, MedicationRequest medicationRequest) { MedicationAdministration medicationResource = new MedicationAdministration(); medicationResource.setSubject(new Reference(personEntry.getFullUrl())); medicationResource.setContext(new Reference(encounterEntry.getFullUrl())); Code code = medication.codes.get(0); String system = code.system.equals("SNOMED-CT") ? SNOMED_URI : RXNORM_URI; medicationResource.setMedication(mapCodeToCodeableConcept(code, system)); medicationResource.setEffective(new DateTimeType(new Date(medication.start))); medicationResource.setStatus(MedicationAdministrationStatus.fromCode("completed")); if (medication.prescriptionDetails != null) { JsonObject rxInfo = medication.prescriptionDetails; MedicationAdministrationDosageComponent dosage = new MedicationAdministrationDosageComponent(); // as_needed is true if present if ((rxInfo.has("dosage")) && (!rxInfo.has("as_needed"))) { Quantity dose = new SimpleQuantity().setValue( rxInfo.get("dosage").getAsJsonObject().get("amount").getAsDouble()); dosage.setDose((SimpleQuantity) dose); if (rxInfo.has("instructions")) { for (JsonElement instructionElement : rxInfo.get("instructions").getAsJsonArray()) { JsonObject instruction = instructionElement.getAsJsonObject(); dosage.setText(instruction.get("display").getAsString()); } } } medicationResource.setDosage(dosage); } if (!medication.reasons.isEmpty()) { // Only one element in list Code reason = medication.reasons.get(0); for (BundleEntryComponent entry : bundle.getEntry()) { if (entry.getResource().fhirType().equals("Condition")) { Condition condition = (Condition) entry.getResource(); // Only one element in list Coding coding = condition.getCode().getCoding().get(0); if (reason.code.equals(coding.getCode())) { medicationResource.addReasonReference().setReference(entry.getFullUrl()); } } } } BundleEntryComponent medicationAdminEntry = newEntry(bundle, medicationResource); return medicationAdminEntry; }
Example #17
Source File: TestData.java From bunsen with Apache License 2.0 | 3 votes |
/** * Returns a FHIR medication request for testing purposes. */ public static MedicationRequest newMedRequest() { MedicationRequest medReq = new MedicationRequest(); medReq.setId("test-med"); // Medication code CodeableConcept med = new CodeableConcept(); med.addCoding() .setSystem("http://www.nlm.nih.gov/research/umls/rxnorm") .setCode("582620") .setDisplay("Nizatidine 15 MG/ML Oral Solution [Axid]"); med.setText("Nizatidine 15 MG/ML Oral Solution [Axid]"); medReq.setMedication(med); Annotation annotation = new Annotation(); annotation.setText("Test medication note."); annotation.setAuthor( new Reference("Provider/example") .setDisplay("Example provider.")); medReq.addNote(annotation); return medReq; }
Example #18
Source File: AvroConverterTest.java From bunsen with Apache License 2.0 | 2 votes |
/** * Initialize test data. */ @BeforeClass public static void convertTestData() throws IOException { AvroConverter observationConverter = AvroConverter.forResource(FhirContexts.forStu3(), "Observation"); avroObservation = (Record) observationConverter.resourceToAvro(testObservation); testObservationDecoded = (Observation) observationConverter.avroToResource(avroObservation); avroObservationNullStatus = (Record) observationConverter .resourceToAvro(testObservationNullStatus); testObservationDecodedNullStatus = (Observation) observationConverter .avroToResource(avroObservationNullStatus); AvroConverter patientConverter = AvroConverter.forResource(FhirContexts.forStu3(), TestData.US_CORE_PATIENT); avroPatient = (Record) patientConverter.resourceToAvro(testPatient); testPatientDecoded = (Patient) patientConverter.avroToResource(avroPatient); AvroConverter conditionConverter = AvroConverter.forResource(FhirContexts.forStu3(), TestData.US_CORE_CONDITION); avroCondition = (Record) conditionConverter.resourceToAvro(testCondition); testConditionDecoded = (Condition) conditionConverter.avroToResource(avroCondition); AvroConverter medicationConverter = AvroConverter.forResource(FhirContexts.forStu3(), TestData.US_CORE_MEDICATION); Record avroMedication = (Record) medicationConverter.resourceToAvro(testMedicationOne); testMedicationDecoded = (Medication) medicationConverter.avroToResource(avroMedication); AvroConverter medicationRequestConverter = AvroConverter.forResource(FhirContexts.forStu3(), TestData.US_CORE_MEDICATION_REQUEST, Arrays.asList(TestData.US_CORE_MEDICATION, TestData.PROVENANCE)); avroMedicationRequest = (Record) medicationRequestConverter .resourceToAvro(testMedicationRequest); testMedicationRequestDecoded = (MedicationRequest) medicationRequestConverter .avroToResource(avroMedicationRequest); AvroConverter converterBunsenTestProfilePatient = AvroConverter .forResource(FhirContexts.forStu3(), TestData.BUNSEN_TEST_PATIENT); avroBunsenTestProfilePatient = (Record) converterBunsenTestProfilePatient .resourceToAvro(testBunsenTestProfilePatient); testBunsenTestProfilePatientDecoded = (Patient) converterBunsenTestProfilePatient .avroToResource(avroBunsenTestProfilePatient); }
Example #19
Source File: SparkRowConverterTest.java From bunsen with Apache License 2.0 | 2 votes |
/** * Loads resource definitions used for testing. */ @BeforeClass public static void loadDefinition() throws IOException { fhirContext = FhirContexts.forStu3(); SparkRowConverter patientConverter = SparkRowConverter.forResource(fhirContext, TestData.US_CORE_PATIENT); Row testPatientRow = patientConverter.resourceToRow(testPatient); testPatientDataset = spark.createDataFrame(Collections.singletonList(testPatientRow), patientConverter.getSchema()); testPatientDecoded = (Patient) patientConverter.rowToResource(testPatientDataset.head()); SparkRowConverter observationConverter = SparkRowConverter.forResource(fhirContext, TestData.US_CORE_OBSERVATION); Row testObservationRow = observationConverter.resourceToRow(testObservation); testObservationDataset = spark.createDataFrame(Collections.singletonList(testObservationRow), observationConverter.getSchema()); testObservationDecoded = (Observation) observationConverter.rowToResource(testObservationDataset.head()); Row testObservationNullStatusRow = observationConverter .resourceToRow(testObservationNullStatus); testObservationNullStatusDataset = spark.createDataFrame( Collections.singletonList(testObservationNullStatusRow), observationConverter.getSchema()); testObservationDecodedNullStatus = (Observation) observationConverter .rowToResource(testObservationNullStatusDataset.head()); SparkRowConverter conditionConverter = SparkRowConverter.forResource(fhirContext, TestData.US_CORE_CONDITION); Row testConditionRow = conditionConverter.resourceToRow(testCondition); testConditionDataset = spark.createDataFrame(Collections.singletonList(testConditionRow), conditionConverter.getSchema()); testConditionDecoded = (Condition) conditionConverter.rowToResource(testConditionDataset.head()); SparkRowConverter medicationRequestConverter = SparkRowConverter.forResource(fhirContext, TestData.US_CORE_MEDICATION_REQUEST, Arrays.asList(TestData.US_CORE_MEDICATION, TestData.PROVENANCE)); Row testMedicationRequestRow = medicationRequestConverter.resourceToRow(testMedicationRequest); testMedicationRequestDataset = spark.createDataFrame( Collections.singletonList(testMedicationRequestRow), medicationRequestConverter.getSchema()); testMedicationRequestDecoded = (MedicationRequest) medicationRequestConverter .rowToResource(testMedicationRequestDataset.head()); SparkRowConverter converterBunsenTestProfilePatient = SparkRowConverter .forResource(FhirContexts.forStu3(), TestData.BUNSEN_TEST_PATIENT); Row testBunsenTestProfilePatientRow = converterBunsenTestProfilePatient .resourceToRow(testBunsenTestProfilePatient); testBunsenTestProfilePatientDataset = spark .createDataFrame(Collections.singletonList(testBunsenTestProfilePatientRow), converterBunsenTestProfilePatient.getSchema()); testBunsenTestProfilePatientDecoded = (Patient) converterBunsenTestProfilePatient .rowToResource(testBunsenTestProfilePatientRow); }
Example #20
Source File: MedicationRequestRepository.java From careconnect-reference-implementation with Apache License 2.0 | votes |
MedicationRequest create(FhirContext ctx,MedicationRequest prescription, @IdParam IdType theId, @ConditionalUrlParam String theConditional) throws OperationOutcomeException;
Example #21
Source File: MedicationRequestRepository.java From careconnect-reference-implementation with Apache License 2.0 | votes |
MedicationRequest read(FhirContext ctx, IdType theId);