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• gepard-master
  • src
    • matrices
      • matrices.xml
      • blosum62.mat
      • protidentity.mat
      • edna.mat
      • pam250.mat
      • ednaorig.mat
    • org
      • gepard
        • client
          • DrawTarget.java
          • Plotter.java
          • InvalidParamSetException.java
          • BrowserLauncher.java
          • cmdline
            • InvalidArgumentsException.java
            • CommandLineArguments.java
            • CommandLine.java
          • AutoParameters.java
          • DotplotInfo.java
          • SubstMatrixFile.java
          • Controller.java
          • Config.java
          • ClientGlobals.java
          • SubstMatrixList.java
          • userinterface
            • HelpTexts.java
            • MainPanel.java
            • UserMessageDialog.java
            • ExampleFileFilter.java
            • CustomComboBox.java
            • ControlPanel.java
            • StatusDialog.java
            • WindowPos.java
            • ProxyDialog.java
            • AboutDialog.java
            • DrawPanel.java
            • InfoPanel.java
            • ContainerWindow.java
          • Start.java
          • GeneNames.java
        • common
          • CompressedDotMatrix.java
          • Sequence.java
          • VmatchConverter.java
          • FASTAReader.java
          • InvalidSubMatFileException.java
          • DotMatrix.java
          • Base64.java
          • ParameterSet.java
          • SAXFinishedException.java
          • LEDataOutputStream.java
          • SubstitutionMatrix.java
          • GenSAFileVmatch.java
          • GenSAFile.java
          • SuffixArray.java
          • LEDataInputStream.java
          • AbortionChecker.java
          • DotMatrixCallback.java
          • Compression.java
          • FASTAWriter.java
          • InvalidFASTAFileException.java
  • resources
    • help
      • usermsg.txt
      • reference.txt
      • help.xml
    • images
      • logo.gif
      • zoomfull.gif
      • zoomin.gif
      • export.gif
      • zoomout.gif
      • gepard.gif
    • tutorial.html
    • matrices
      • matrices.xml
      • blosum62.mat
      • protidentity.mat
      • edna.mat
      • pam250.mat
      • ednaorig.mat
  • Gepard.jardesc
  • dist
    • Gepard-1.40.jar
  • LICENSE
  • README.txt
  • tutorial.html
  • README.md
  • README run without JAR.txt
  • LICENSE.txt
  • .project
  • .classpath

gepard

Genome Pair Rapid Dotter (gepard)