DOI

MorphoLibJ

Collection of mathematical morphology methods and plugins for ImageJ, created at the INRA-IJPB Modeling and Digital Imaging lab.

The library implements several functionalities that were missing in the ImageJ software, and that were not or only partially covered by other plugins. Namely:

Installation

  1. Select Help > Update... from the Fiji menu to start the updater.

  2. Click on Manage update sites. This brings up a dialog where you can activate additional update sites.

  3. Activate the IJPB-plugins update site and close the dialog. Now you should see an additional jar file for download.

  4. Click Apply changes and restart Fiji.

Documentation

A more detailed presentation of the library and its plugins is available on the ImageJ/Fiji Wiki.

We have as well a User Manual in pdf format.

The main source code directory is src/main/java/inra/ijpb.

You can browse the javadoc for more information about its API.

Citation

Please note that MorphoLibJ is based on a publication. If you use it successfully for your research please be so kind to cite our work: