MR-algorithms/YAP

YAP-master
- GrappaRecon
  - GrappaRecon.vcxproj.filters
  - targetver.h
  - Grappa.cpp
  - stdafx.cpp
  - GrappaRecon.vcxproj
  - dllmain.cpp
  - Grappa.h
  - stdafx.h
- PluginSDK
  - BasicRecon
    - NLM.cpp
    - NiumagFidWriter.h
    - ZeroFilling.cpp
    - FineCF.cpp
    - SliceIterator.h
    - ChannelIterator.cpp
    - CmrDataReader.cpp
    - JpegExporter.cpp
    - DataTypeConvertor.cpp
    - CalcuArea.cpp
    - NiumagFidReader.cpp
    - SliceMerger.cpp.rej
    - NiuMriImageReader.h
    - BasicRecon.cpp
    - NLM.h
    - GrayScaleUnifier.h
    - PhaseCorrector.cpp
    - NiuMriImageWriter.h
    - ZeroFilling.h
    - SubSampling.h
    - PhaseCorrector.h
    - Fft2D.cpp
    - Difference.cpp
    - LinesSelector.h
    - Difference.h
    - NiumagPFFTConjugator.cpp
    - LinesSelector.cpp
    - CmrDataReader.h
    - DataTypeConvertor.h
    - imageProcessing.h
    - ChannelIterator.h
    - SliceMerger.cpp
    - NiumagImgReader.cpp
    - Nlmeans.h
    - packages.config
    - ChannelMerger.h
    - BasicRecon.vcxproj.filters
    - Fft3D.h
    - Fft1D.h
    - GrayScaleUnifier.cpp
    - SliceMerger.h
    - targetver.h
    - Fft1D.cpp
    - SampleDataProtocol.cpp
    - IcePeFt.h
    - SliceIterator.cpp
    - Algorithm2DWrapper.h
    - ChannelDataCollector.h
    - FineCF.h
    - ComplexSplitter.h
    - NiumagFidWriter.cpp
    - Nlmeans.cpp
    - ModulePhase.cpp
    - stdafx.cpp
    - SliceSelector.cpp
    - SliceSelector.h
    - NiumagImgReader.h
    - NiuMriImageReader.cpp
    - JpegExporter.h
    - NiumagPFFTConjugator.h
    - dllmain.cpp
    - Fft3D.cpp
    - CalcuArea.h
    - NiuMriImageWriter.cpp
    - IcePeFt.cpp
    - stdafx.h
    - ModulePhase.h
    - ChannelDataCollector.cpp
    - ChannelMerger.cpp
    - Fft2D.h
    - ComplexSplitter.cpp
    - BasicRecon.vcxproj
    - NiumagFidReader.h
    - SubSampling.cpp
  - PluginSDK.sln
  - PythonRecon
    - ExtractFeatures.h
    - NiiReader.h
    - PythonRecon.vcxproj.filters
    - RFeaturesCollector.cpp
    - ExtractFeatures.cpp
    - PythonRecon.cpp
    - FileIterator.cpp
    - FolderCollector.cpp
    - packages.config
    - PyClassification.cpp
    - NiiReader.cpp
    - RFeaturesCollector.h
    - targetver.h
    - FolderCollector.h
    - PythonRecon.vcxproj
    - FolderIterator.h
    - FileIterator.h
    - stdafx.cpp
    - dllmain.cpp
    - PyClassification.h
    - FolderIterator.cpp
    - ReadMe.txt
    - stdafx.h
    - Python
      - demo_test.py
      - Radiomics_assist.py
      - classify.py
      - Py2C.py
      - ExtractFeatures.py
      - excel_helper.py
      - TransferListDimensionOrder.py
      - ReadNiiPathFiles.py
      - Radiomics_ExtractFeatures.py
      - Radiomics_Classify.py
      - my_utility
        classTree.py
        AttrDisplay1.py
        reloadall.py
        __init__.py
        AttrDisplay.py
- Shared
  - PythonImplement
    - packages.config
    - PythonImplement.vcxproj
    - PythonImpl.cpp
    - PythonImpl.h
    - dllmain.cpp
    - PythonImplement.vcxproj.filters
    - ReadMe.txt
  - Implement
    - VariableSpace.h
    - resource.h
    - VariableTable.cpp
    - LogUserImpl.cpp
    - PythonUserImpl.cpp
    - Implement.vcxproj
    - DataObject.cpp
    - LogImpl.h
    - packages.config
    - ProcessorImpl.cpp
    - Implement.vcxproj.filters
    - LogImpl.cpp
    - VariableTable.h
    - LogUserImpl.h
    - ProcessorImpl.h
    - ContainerImpl.h
    - TypeManager.h
    - Implement.rc
    - PythonUserImpl.h
    - README.md
    - YapImplement.h
    - VariableSpace.cpp
    - CompositeProcessor.cpp
    - TypeManager.cpp
    - DataObject.h
    - ImplememtClassDiagram.cd
    - CompositeProcessor.h
    - details
      - structVariable.h
      - arrayVariable.h
      - simpleVariable.h
      - variableShared.h
  - Utilities
    - FileSystem.h
    - Utilities.vcxproj
    - scrrun.c
    - Markup.cpp
    - scrrun.h
    - macros.h
    - packages.config
    - Markup.h
    - xml.cpp
    - targetver.h
    - CommonMethod.h
    - Clipboard.h
    - FileSystem.cpp
    - Clipboard.cpp
    - Utilities.vcxproj.filters
    - StringHelper.h
    - stdafx.cpp
    - CommonMethod.cpp
    - stdafx.h
    - xml.h
  - Client
    - packages.config
    - targetver.h
    - DataHelper.cpp
    - DataHelper.h
    - Client.vcxproj
    - stdafx.cpp
    - stdafx.h
    - Client.vcxproj.filters
  - Interface
    - Interface.sln
    - Interface.vcxproj.filters
    - Interface.vcxproj
    - packages.config
    - IContainer.h
    - ILog.h
    - smartptr.h
    - IPythonUser.h
    - IData.h
    - InterfaceClassDiagram.cd
    - IPython.h
    - IProcessor.h
    - Interfaces.h
    - IVariable.h
- Doxyfile
- LICENSE
- BasicRecon_GPU
  - pre_cuFft2D.cu
  - BasicRecon_GPU.vcxproj.filters
  - targetver.h
  - cuFft2D.cpp
  - cuFft2D.h
  - stdafx.cpp
  - BasicRecon_GPU.vcxproj
  - dllmain.cpp
  - ReadMe.txt
  - stdafx.h
  - BasicRecon_GPU.cpp
- README.md
- PluginSdk
  - BasicRecon
    - DcRemover.h
    - DcRemover.cpp
    - SamplingMaskCreator.h
    - SamplingMaskCreator.cpp
- API
  - PipelineTest
    - YapDebugger.h
    - YapDebugger.cpp
    - packages.config
    - targetver.h
    - sysParams_yap.txt
    - ProcessorDebugger.cpp
    - Pipelines
      - Test.pipeline
      - NiumagFidWriter.pipeline
      - NiumagFidWriterReader.pipeline
      - Test1b.pipeline
      - FFT3DTest.pipeline
      - CompressedSensing2test.pipeline
      - niumag_recon.pipeline
      - demo.pipeline
      - NiumagImgWriterReader.pipeline
      - FineCF.pipeline
      - test_niumag_recon.pipeline
      - demoRadiomics.pipeline
      - grappa.pipeline
      - ImgPythonShow.pipeline
      - Test1-pjf.pipeline
      - Test_niumag_recon_yaplocal.pipeline
      - demoNiiReader.pipeline
      - Radiomics_test2.pipeline
      - CompressedSensing2.pipeline
      - NiuMriImageReader.pipeline
      - Test0_qt.pipeline
      - NiumagImgReader.pipeline
      - PartialFFT.pipeline
      - Radiomics_test.pipeline
      - NiuMriImageWriter.pipeline
      - Test0.pipeline
      - NiumagFidReader.pipeline
      - CompressedSensing.pipeline
      - Test0b.pipeline
    - stdafx.cpp
    - PipelineTest.vcxproj
    - ProcessorDebugger.h
    - ReadMe.txt
    - PipelineTest.cpp
    - stdafx.h
    - daub2.flt
    - PipelineTest.vcxproj.filters
  - ReconDemo
    - MessagePack
      - reconserver.h
      - CmrPackItemTypeHelper.h
      - datapackage.cpp
      - reconclientsocket.cpp
      - datapackage.h
      - SampleDataProtocol.cpp
      - SampleDataProtocol.h
      - CmrPackType.h
      - reconserver.cpp
      - reconclientsocket.h
    - mainwindow.h
    - imagelayoutwidget.cpp
    - mainwindow.cpp
    - main.cpp
    - rectcalc.cpp
    - ReconDemo.pro.user.18
    - Geometry
      - Rect2D.cpp
      - Segment2D.cpp
      - Matrix33.h
      - Rect2D.h
      - Segment3D.cpp
      - Rect3D.cpp
      - Segment2D.h
      - Line3D.h
      - Plane.cpp
      - Plane.h
      - algorithm.cpp
      - algorithm.h
      - cmatrix44.h
      - geometry.h
      - Angle.h
      - Segment3D.h
      - Line3D.cpp
      - Rect3D.h
      - Matrix33.cpp
      - cmatrix44.cpp
    - mainwindow.cpp.g16660
    - mainwindow.cpp.H16660
    - Reactor
      - Reactor.h
      - ReactorImpl.cpp
      - ConnectionHandler.h
      - ListenHandler.h
      - ListenHandler.cpp
      - ReactorImpl.h
      - 代码说明.txt
      - EventHandler.h
      - SpecControl.vcxproj.filters
      - SpecControl.vcxproj
      - ConnectionHandler.cpp
      - WindowsDemultiplexer.cpp
      - ReadMe.txt
      - WindowsDemultiplexer.h
      - EventDemultiplexer.h
      - Reactor.cpp
    - imagewindowmapper.cpp
    - imagewidget.h
    - config
      - pipelines
        Shimming.pipeline
        LoadNiuMriImage.pipeline
        RFAmp.pipeline
        ViewShimming.pipeline
        niumag_recon.pipeline
        ViewO1.pipeline
        MSERecon.pipeline
        SFO1.pipeline
        LoadImage.pipeline
        ExportJpeg.pipeline
        realtime_recon.pipeline
        realtime_recon.pipeline.bak
        Scout.pipeline
        ViewScout.pipeline
        realtime_recon2.pipeline
        Test0_qt.pipeline
        ViewRFAmp.pipeline
        realtime_recon2.pipeline.bak
        NiuSE.pipeline
    - ReconDemo.pro.user.3.0-pre1
    - mainwindow.ui
    - datamanager.cpp
    - imagewidget.cpp
    - plot1d.h
    - imagelayoutwidget.h
    - datamanager.h
    - imageobject.h
    - StringHelper.h
    - Processors
      - Display2D.cpp
      - ReceiveData.h
      - rawdata.cpp
      - ReceiveData.cpp
      - ReceiveData.cpp.autosave.Ak9836
      - Display2D.h
      - Rawdata.h
      - Display1D.h
      - Display1D.cpp
    - ReconDemo.pro
    - imagewindowmapper.h
    - QtUtilities
      - commonmethod.h
      - DataWatch.h
      - commonmethod.cpp
      - DataWatch.cpp
      - FormatString.cpp
      - FormatString.h
    - imageobject.cpp
    - mainwindow.cpp.l16660
    - mainwindow.cpp.bak
    - plot1d.cpp
    - mainwindow.cpp.E16660
    - rectcalc.h
    - mainwindow.cpp.F16660
    - imagewidget.cpp.bak
    - grayscalemapper.cpp
    - grayscalemapper.h
  - YAP.sln
  - Yap
    - PipelineCompiler.h
    - Preprocessor.cpp
    - YapClient.pro
    - ProcessorAgent.cpp
    - ScanFileParser.cpp
    - packages.config
    - Yap.vcxproj
    - PipelineCompiler.cpp
    - ModuleManager.h
    - VdfParser.cpp
    - VdfParser.h
    - ScanFileParser.h
    - ModuleAgent.h
    - Yap.vcxproj.filters
    - Preprocessor.h
    - ModuleAgent.cpp
    - ModuleManager.cpp
    - PipelineConstructor.h
    - PipelineConstructor.cpp
    - ProcessorAgent.h
  - VirtualMriConsole
    - RawDataReader.h
    - mainwindow.h
    - NiumagFidReader.cpp
    - virtualconsole.h
    - mainwindow.cpp
    - EcnuRawDataReader.h
    - main.cpp
    - CmrPackItemTypeHelper.h
    - datapackage.cpp
    - VirtualMriConsole.pro
    - databin.cpp
    - virtualconsole.cpp
    - EcnuRawDataFile.h
    - mainwindow.cpp.orig
    - datapackage.h
    - databin.h
    - mainwindow.ui
    - myevent.h
    - EcnuRawDataFile.cpp
    - databin.cpp.rej
    - SampleDataProtocol.cpp
    - VirtualMriConsole.pro.user.3.0-pre1
    - VirtualMriConsole.pro.user.996de41
    - myevent.cpp
    - EcnuRawDataReader.cpp
    - VirtualMriConsole.pro.user.18
    - SampleDataProtocol.h
    - mask.h
    - CmrPackType.h
    - scantask.h
    - scantask.cpp
    - communicator.h
    - communicator.cpp
    - mask.cpp
    - NiumagFidReader.h
  - UnitTests
    - PreprocessorUnitTests.cpp
    - VdfUnitTests.cpp
    - packages.config
    - targetver.h
    - PipelineCompilerUnitTest.cpp
    - ScanFileParserUnitTest.cpp
    - stdafx.cpp
    - ReadMe.txt
    - PipelineUnitTests.vcxproj
    - stdafx.h
    - PipelineUnitTests.vcxproj.filters
- .gitignore
- YapAll.sln